Publications

1. Uffelman E, Huang QQ, Munung NS, de Vries J, Okada Y, Martin AR, et al. Genome-wide association studies. Nature Reviews Methods Primers, 1, p. 59 (2021).

2. Moro A, Van Nifterick A, Toonen RF, Verhage M. Dynamin controls neuropeptide secretion by organizing dense-core vesicle fusion sites. Science Advances, 7 (2021).

3. Aevermann BD, Zhang Y, Novotny M, Keshk M, Bakken TE, Miller JA, et al. A machine learning method for the discovery of minimum marker gene combinations for cell-type identification from single-cell RNA sequencing. Genome Research (2021).

4. Michielsen L, Reinders MJT, Mahfouz A. Hierarchical progressive learning of cell identities in single-cell data. Nature Communications, 12, 2799 (2021).

5. De Kloet SF, Bruinsma B, Terra H, Heistek TS, Passchier EMJ, Van den Berg AR, et al. Bi-directional regulation of cognitive control by distinct prefrontal cortical output neurons to thalamus and striatum. Nature Communications, 12, 1994 (2021).

6. Robinson RA, Griffiths SC, Van de Haar LL, Malinauskas T, Van Battum EY, Zelina P, et al. Simultaneous binding of guidance cues NET1 and RGM blocks extracellular NEO1 signaling. Cell, 184, 2103-2120 (2021).

7. Meijer M, Keo A, van Leeuwen JMC, Dzyubachyk O, Meijer OC, Vinkers CH, Mahfouz A. Molecular characterization of the stress network in individuals at risk for schizophrenia. Neurobiology of Stress, 14, 100307 (2021).

8. Abdelaal T, De Raadt P, Lelieveldt BPF, Reinders M, Mahfouz A. SCHNEL: scalable clustering of high dimensional single-cell data. Bioinformatics, 36, i849-i856 (2020).

9. Terra H, Bruinsma B, de Kloet SF, van der Roest M, Pattij T, Mansvelder HD. Prefrontal cortical projection neurons targeting dorsomedial striatum control behavioral inhibtion. Current Biology, 30, 4188-4200 (2020).

10. Uffelman E, Posthuma D. Emerging methods and resources for biological interrogation of neuropsychiatric polygenic signal. Biological Psychiatry, 89, 41-53 (2020).

11. Charrout M, Reinders MJT, Mahfouz A. Untangling biological factors influencing trajectory inference from single cell data. Bioinformatics, 2 (2020).

12. Verhage M, Sørensen JB. SNAREopathies: Diversity in mechanisms and symptoms. Neuron, 107, 22-37 (2020).